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Bioinformatics and bio-mathematical modelling

Explore mathematical approaches to plant biology, from genetic information to cellular processes, plant-environment interactions, and climate change models to understand how plants function.

About

Using mathematical approaches to biological problems underpins many research approaches to understand how plants operate. This approach applies to many aspects of plant biology, ranging from understanding genetic information content, function of molecular & cellular processes, plant-environment interactions and global climate change models.

Groups

Our research is aimed at uncovering the genetic and genomic basis of morphological complexity in animals, from both developmental and evolutionary perspectives.

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We study the genetic basis of Climate Adaptation in foundation plant species, using state of the art Genomic and Phenomic techniques

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We use phylogenetic comparative methods to investigate the characteristics of lineages that influence the pattern and rate of genome evolution.

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Fahrer group

We are working on a very simple and inexpensive cancer immunotherapy treatment, and a bioinformatics study looking for novel proteins in different genomes.

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A possom on a tree

The aim of our research is to understand the ecology and evolution of interactions between plants and animals in the Australian biota.

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We focus on understanding what processes shape the distribution of genetic variation.The nature of our work is largely computational and statistical.

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We investigate the molecular basis of disease and disease resistance in tomato (leaf mould and Fusarium wilt resistance) and flax (flax rust resistance).​

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Our work is motivated by the desire to understand molecular evolution, from the origin of mutations in individuals to their fixation in evolving lineages.

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Our main research interest is in fungal-plant-interactions, both applied and pure research, on a range of important pathogens.

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Our research actually spans may study systems and research questions. But the evolution of honey bee parasites and diseases and is a major focus.

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Pogson group

The overarching theme of our research is to determine the controls and regulators of communication between the chloroplast and nucleus.

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The Price lab is presently focusing on the molecular biology and physiology of photosynthesis in cyanobacteria (blue-green photosynthetic bacteria) and plants

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Rathjen group focuses on all aspects of plant immunity, characterising the fascinating interplay between host and pathogen.

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Our team focuses on questions around plant biosecurity in Australia by studying the interaction between plants and their fungal pathogen.

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Associate Professor Ana M. M. Sequeira, a marine ecologist based at ANU, leads breakthrough research in the field of marine megafauna movement and conservation.

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The Solomon group focuses on pathogens of wheat that threaten food security and stability.

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We study aspects of the evolutionary process, including mutational events, the genetic basis of fitness-related traits, and genetic variation.

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Projects

All domains of modern biology are increasingly dependent on computation and this dependence on algorithms is most readily apparent in the disciplines that utilise genetic data.

Student intake

Open for Bachelor, Honours, Master, PhD students

People

This project uses next-generation and third-gen sequencing to characterize the genomes of wheat stripe rust, a severe fungal pathogen on wheat crops worldwide. We use these data to identify rust effector proteins to describe their roles in the pathogenesis and host resistance. New projects in this area include the use of epigenomics to understand the rapid evolution of these devastating fungal pathogens. You should have a strong background in molecular biology, and experience or interest in coding using languages such as Python or R.

Student intake

Open for Bachelor, Honours, PhD students

People

Reducing the cost of seawater desalination by copying the action of cell membranes.

Student intake

Open for Bachelor, Honours, Master, PhD students

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This project is looking to install the C4 pathway from maize into rice, to supercharge photosynthesis and increase crop yeilds.
It is part of a C4 rice international consortium of labs, and is funded by the Bill and Melinda Gates Foundation.

Student intake

Open for Honours, PhD students

People

This project aims to develop theoretical models linking cooperative behaviour, environmental variability, and population dynamics. It will test these models using long-term datasets from various Australian fairy wren species, exploring how cooperation influences species' climate sensitivity and extinction risk.

A primary biosecurity threat to the Australian wheat industry is Zymoseptoria tritici, a fungal pathogen. Research is currently underway to understand how the pathogen interacts with wheat and causes disease. Opportunities exist for students at all levels to become involved in this project.

Student intake

Open for Bachelor, Honours, Master, PhD students

People

News

Owen Atkin at the opening of CEAT. Image Sharyn Wragg

Professor Owen Atkin is a Group Leader at RSB Plant Sciences, the Vice Chancellor's Entrepreneurial Professor at ANU, and the Director of the Centre for Entrepreneurial Agri-Technology (CEAT) - a collaboration between ANU and CSIRO, with investment from the ACT Government.

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New research from Australia and Finland could help explain one of nature's strangest quirks - why some animals forego mating to help other animals procreate.

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Human error, not human biology, largely accounts for the apparent decline of mortality among the very old, according to a new report by Saul Newman of the Research School of Biology, ANU. The result casts doubt on the hypothesis that human longevity can be greatly extended beyond current limits.

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Meet bioinformatician Marcin Adamski.

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The Rodrigo group research focuses on the development of computational and statistical methods in evolutionary biology.

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