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Plant-microbe interactions

Explore plant-microbe interactions at ANU, from soil and shoot symbioses to pathogens, enhancing growth and productivity in agricultural and natural ecosystems.

About

The interactions of plants with microbes both in the soil and above ground shoot are of great importance for the growth and productivity of plants in agricultural and natural ecosystems. At the Research School of Biology, interactions between plants, symbiotic bacteria, fungi, and pathogens are being investigated at levels ranging from the molecule to the ecosystem.

Groups

A possom on a tree

The aim of our research is to understand the ecology and evolution of interactions between plants and animals in the Australian biota.

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Close-up of a green leaf covered in fine, white frost against a blurred orange background.

We investigate the molecular basis of disease and disease resistance in tomato (leaf mould and Fusarium wilt resistance) and flax (flax rust resistance).​

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A close-up photo of a unique green and maroon orchid with elongated, curved petals and stripes, set against a soft-focus green background.

Our main research interest is in fungal-plant-interactions, both applied and pure research, on a range of important pathogens.

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Fluorescent microscopy image showing a red-stained filamentous structure with a detailed blue-highlighted component at the top, all set against a dark background.

We are interested in the molecular mechanisms controlling nodule development in legumes, and how this is linked to other aspects of root architecture.

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A diagram showing the interaction between microRNA and target mRNA, with images of different growth stages of a plant.

The principal interest of the lab is gene silencing mediated by microRNAs, with a focus on microRNAs that control plant disease resistance.

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Illustration of a green plant with multiple leaves, some of which have yellow spots, on a white background.

Rathjen group focuses on all aspects of plant immunity, characterising the fascinating interplay between host and pathogen.

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A group of people smiling for a photo on a sunny beach with waves in the background.

Our team focuses on questions around plant biosecurity in Australia by studying the interaction between plants and their fungal pathogen.

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Group of eleven diverse people posing together on a sandy beach.

The Solomon group focuses on pathogens of wheat that threaten food security and stability.

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Illustration showing various colored molecular structures superimposed on a plant image with yellow nodules on its stems.

We aim to understand the molecular basis of the interactions between plant hosts and the microorganisms, particularly fungi, that colonise them.

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Projects

ungus Fusarium oxysporum causes devastating wilt diseases of many important crop plants including banana/plantain, cotton, potato, tomato, capsicum, beans, peas, chickpeas and melons. However, individual pathogenic isolates of F. oxysporum are highly specific for a particular species of host plant.

Student intake

Open for Honours, Master students

The aim of this project is to identify mechanisms that contribute to highly efficient biological nitrogen fixation in legumes through symbiosis with nitrogen-fixing bacteria, including under future climate change scenarios.

Student intake

Open for Bachelor, Honours, Master, PhD students

People

Fungi produce many biological active compounds. What are they and what do they do?

Student intake

Open for Honours, Master, PhD students

People

Listed below is an example of projects available in the Solomon Lab. Please contact Peter to discuss these further or other possibilities (note that the skills gained in the project are shown in brackets after the project)

Student intake

Open for Master, PhD students

People

We constantly try to identify new proteins that are involved in plant immunity, and use molecular techniques to understand their interaction partners and how they work together. The sorts of proteins we are interested are pathogen receptors, components of signal transduction pathways that elaborate the immune response, and pathogen virulence molecules called effectors that seek to destroy immunity. We use cutting edge biochemical techniques including high resolution mass spectrometry to perform these studies. It is a fascinating area because the pathogens always seek to evolve new proteins to overcome host immunity, and the plants must change their receptors and use innovative mechanisms to trap the pathogens.

Student intake

Open for Bachelor, Honours, PhD students

People

The proposed PhD research program will use the relationship between the orchid genera Chiloglottis and Arthrochilus and their obligate mycorrhizae to examine speciation in co-evolved taxa. It has been suggested the evolution of the recently diverged Chiloglottis may be attributable to its association with a particular mycorrhizal species however evolution of this sexually-deceptive orchid genus is known to be influenced by a species-specific pollinator relationship

Student intake

Open for PhD students

People

News

While Angus Rae focuses intently on a captivating microscopic world, he is actually working towards a solution for an environmental catastrophe occurring on a global scale.

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A new research centre based at ANU will train the next generation of scientists to develop more resilient crops and significantly grow Australia's agricultural sector.

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Wheat

Some clever detective work by an international team of scientists has uncovered how a deadly fungus - a stem rust called Ug99 - came about through some unusual breeding habits. The discovery will help protect wheat crops around the world from devastating fungal diseases.

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Plant biologist and Head of the Plant Sciences Division at the ANU Research School of Biology, Professor Owen Atkin, has been named the 2019 Vice-Chancellor's Entrepreneurial Fellow for his work around entrepreneurial agri-technology.

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Sam Periyannan was born and brought up on a small sugar cane farm in Southern India. He never dreamed he would become a crop researcher, rather than a cane farmer.

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Simon Williams uses protein biochemistry and structural biology approaches to understand how plant pathogens cause disease and how the plant immune system prevents infection.

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