Publications 2012
Recently accepted publicationsArkell, R. M., & Tam, P.P.L. Initiating head development in mouse embryos: integrating signalling and transcriptional activity.Open Biology.Attenborough, R.M.F., Hayward, D.C., Kitahara, M.V., Miller, D.J. & Ball, E.E. A “neural” enzyme in non-bilaterian animals and algae: Pre-neural origins for peptidylglycine α-amidating monooxygenase (PAM). Molecular Biology and Evolution. Broer S., & Gether U. The solute carrier family 6. British Journal of Pharmacology. Cheng, Y., Stuart, A., Morris, K., Taylor, R., Siddle, H.V., Deakin, J.E., Jones, M., Amemiya, C.T., & Belov, K. Antigen-presenting genes and genomic copy number variations in the Tasmanian devil MHC. BMC Genomics. Deakin, J.E., & Belov, K. A comparative genomics approach to understanding transmissible cancer in Tasmanian devils. Annual Review of Genomics and Human Genetics. Edwards, M.J., Hinds, L.A., Deane, E., & Deakin, J.E. A review of complementary mechanisms which protect the developing marsupial pouch young. Developmental and Comparative Immunology. Hassan, S., & Mathesius, U. Roles for Flavonoids in symbiotic root-rhizosphere interactions. In: Molecular Microbial Ecology of the Rhizosphere. (F. de Bruijn, Ed.) John Wiley & Sons. Jennions, M.D., Kokko, H., & Klug, H. The opportunity to be misled in studies of sexual selection. Journal of Evolutionary Biology. Jin, J., Watt, M. & Mathesius, U. The autoregulation gene SUNN mediates changes in root organ formation in response to nitrogen through alteration of shoot-to-root auxin transport. Plant Physiology. Kokko, H. & Mappes, J. Multiple mating by females is a natural outcome of a null model of mate encounters. Entomologia Experimentalis et Applicata. Kornfeld, A., Horton, T., Yakir, D., Searle, S., Griffin, K.L., Atkin, O.K., Subke J., & Turnbull, M.T. A field-compatible method for measuring alternative respiratory pathway activities in vivo using stable O2 isotope. Plant Cell and Environment. O’Neill, H.C. Niches for extramedullary hematopoiesis in spleen. Niche: Journal of Cellular Therapy and Regenerative Medicine. Poorter, H., Atkin, O.K., Finck, A., Fiorani, F., Gibon, Y., Munns, R., Pons, T., Schurr, U., Stitt, M., Tardieu, F., & Usadel, B. The art of growing plants for experimental purposes; a practical guide for the plant biologist. Functional Plant Biology. Starrfelt, J. & Kokko, H. The multicausal nature of dispersal. In: Informed Dispersal and Spatial Evolutionary Ecology (J. Clobert, M. Baguette, T. Benton and J. Bullock, eds.) Oxford University Press. |
All 2012 publications
Al Nadaf, S., Deakin, J.E., Gilbert, C., Robinson, T.J., Graves, J.A. & Waters, P.D. A cross-species comparison of escape from X inactivation in Eutheria: implications for evolution of X chromosome inactivation. Chromosoma.
Arkell, R. M., & Tam, P.P.L. Initiating head development in mouse embryos: integrating signalling and transcriptional activity. Open Biology.
Attenborough, R.M.F., Hayward, D.C., Kitahara, M.V., Miller, D.J. & Ball, E.E. A “neural” enzyme in non-bilaterian animals and algae: Pre-neural origins for peptidylglycine α-amidating monooxygenase (PAM). Molecular Biology and Evolution
Bhagavatula, P.S., Claudianos, C., Ibbotson, M.R. & Srinivasan, M.V. Optic Flow Cues Guide Flight in Birds. Current Biology.
Broer S., & Gether U. The solute carrier family 6. British Journal of Pharmacology.
Bromham, L. The genome as a life history character: why rate of molecular evolution varies between mammal species. Philosophical Transactions of the Royal Society: Biological Sciences.
Brouwer, L., Richardson, D.S. & Komdeur, J. Helpers at the nest improve late-life offspring performance: evidence from a long-term study and a cross-foster experiment. PLoS ONE.
Cheng, Y., Stuart, A., Morris, K., Taylor, R., Siddle, H.V., Deakin, J.E., Jones, M., Amemiya, C.T., & Belov, K. Antigen-presenting genes and genomic copy number variations in the Tasmanian devil MHC. BMC Genomics.
Dalziell, A. & Magrath, R. Fooling the experts: accurate vocal mimicry in the song of the superb lyrebird, Menura novaehollandiae. Animal Behaviour.
Deakin, J.E., & Belov, K. A comparative genomics approach to understanding transmissible cancer in Tasmanian devils. Annual Review of Genomics and Human Genetics.
Di Marco, M., Cardillo, M., Possingham, H.P., Wilson, K.A., Blomberg, S.P., Boitani, L., & Rondinini, C. A novel approach for global mammal extinction risk reduction. Conservation Letters.
Edwards, M.J., Hinds, L.A., Deane, E., & Deakin, J.E. A review of complementary mechanisms which protect the developing marsupial pouch young. Developmental and Comparative Immunology.
Feeney, W.E., Welbergen, J.A., & Langmore, N.E. The front-line of avian brood parasite-host coevolution. Animal Behaviour.
Foret, S., Kucharski, R., Pellegrini, M., Jacobsen, S.E., Robinson, G.E., & Maleszka, R. DNA methylation dynamics, metabolic fluxes, gene splicing and alternative phenotypes in honey bees. Proc. Natl Acad Sci USA.
Goldie, X., Lanfear, R., & Bromham, L. Diversification and the rate of molecular evolution: no evidence of a link in mammals. BMC Evolutionary Biology.
Harrison, M.T., Evans, J.R., Dove, H. & Moore, A.D. Recovery dynamics of rainfed winter wheat after livestock grazing. 2. Light interception, radiation-use efficiency and dry-matter partitioning. Crop & Pasture Science.
Harrison, M.T., Evans, J.R., Moore, A.D. & Dove, H. Dual-purpose cereals: can the relative influences of management and environment on crop recovery and grain yield be dissected? Crop & Pasture Science.
Harrison, M.T., Moore, A.D., Dove, H., Evans, J.R. Recovery dynamics of rainfed winter wheat after livestock grazing. 1. Growth rates, grain yields, soil water use and water-use efficiency. Crop & Pasture Science.
Hassan, S. & Mathesius, U.The role of flavonoids in root-rhizosphere signalling - opportunities and challenges for improving plant-microbe interactions. Journal of Experimental Botany.
Hassan, S. and Mathesius, U. (2012) The role of flavonoids in root-rhizosphere signaling - opportunities and challenges for improving plant-microbe interactions. Journal of Experimental Botany.
Al Nadaf, S., Deakin, J.E., Gilbert,C., Robinson, T.J., Graves, J.A. & Waters, P.D. (2011). A cross-species comparison of escape from X inactivation in Eutheria: implications for evolution of X chromosome inactivation. Chromosoma.
Bhagavatula, P.S., Claudianos, C., Ibbotson, M. R. & Srinivasan, M.V. (2011). Optic Flow Cues Guide Flight in Birds. Current biology, 21, 1794 – 1799.
Harrison, M.T., Moore, A.D., Dove, H. Evans, J.R. (2012) Recovery dynamics of rainfed winter wheat after livestock grazing. 1. Growth rates, grain yields, soil water use and water-use efficiency. Crop & Pasture Science.
Harrison, M.T., Evans, J.R., Moore, A.D. & Dove, H. (2012) Dual-purpose cereals: can the relative influences of management and environment on crop recovery and grain yield be dissected? Crop & Pasture Science.
Harrison, M.T., Evans, J.R., Dove, H. & Moore, A.D. (2012) Recovery dynamics of rainfed winter wheat after livestock grazing. 2. Light interception, radiation-use efficiency and dry-matter partitioning. Crop & Pasture Science.
Hassan, S. & Mathesius, U. (2012) The role of flavonoids in root-rhizosphere signaling - opportunities and challenges for improving plant-microbe interactions. Journal of Experimental Botany.
Jennions, M.D., Kokko, H., & Klug, H. The opportunity to be misled in studies of sexual selection. Journal of Evolutionary Biology.
Kahn, A.T., Livingston, J.D., & Jennions ,M.D. (2012). Do females preferentially associate with males given a better start in life? Biology Letters.
Kokko, H. Dyadic contests: modelling fights between two individuals. In I.C.W. Hardy, & M. Briffa (Eds.), Animal Contests. Oxford University Press.
Kokko, H. Conflict and Restraint in Animal Species: Implications for War and Peace. In D, Fry,(E d), War, Peace, and Human Nature. Oxford University Press.
Hassan, S., & Mathesius, U. Roles for Flavonoids in symbiotic root-rhizosphere interactions. In: Molecular Microbial Ecology of the Rhizosphere. (F. de Bruijn, Ed.) John Wiley & Sons.
Hinton, R.A. & O’Neill, H.C. Extramedullary hematopoiesis leading to the production of a novel antigen-presenting cell types in murine spleen. In Hematopoietic Stem Cells: New Research. Nova Science Publishers. New York.
Ho. S.Y.W., Lanfear, R., Bromham, L., Phillips, M.J., Soubrier, J., Rodrigo, A.G., & Cooper, A. Time-dependent rates of molecular evolution. Molecular Ecology.
Jennions, M.D., Kokko, H., & Klug, H. The opportunity to be misled in studies of sexual selection. Journal of Evolutionary Biology.
Jin, J., Watt, M. & Mathesius, U. The autoregulation gene SUNN mediates changes in root organ formation in response to nitrogen through alteration of shoot-to-root auxin transport. Plant Physiology.
Kahn, A.T., Livingston, J.D., & Jennions, M.D. Do females preferentially associate with males given a better start in life? Biology Letters.
Kokko, H. & Mappes, J. Multiple mating by females is a natural outcome of a null model of mate encounters. Entomologia Experimentalis et Applicata.
Kokko, H. Conflict and Restraint in Animal Species: Implications for War and Peace. In D. Fry (Ed.), War, Peace, and Human Nature. Oxford University Press.
Kokko, H. Dyadic contests: modelling fights between two individuals. In I.C.W. Hardy, & M. Briffa (Eds.), Animal Contests. Oxford University Press.
Kornfeld, A., Horton, T., Yakir, D., Searle, S., Griffin, K.L., Atkin, O.K., Subke J., & Turnbull, M.T. A field-compatible method for measuring alternative respiratory pathway activities in vivo using stable O2 isotope. Plant Cell and Environment.
Langmore, N.E., Feeney, W., Crowe-Riddell, J., Luan, H., Louwrens, K.M., & Cockburn, A. Learned recognition of brood parasitic cuckoos in the superb fairy-wren Malurus cyaneus. Behavioral Ecology.
Leigh, A., Sevanto, S., Ball, M.C., Close, J.D., Ellsworth, D.S., Knight, C.A., Nicotra, A.B. & Vogel, S. Do thick leaves avoid thermal damage in critically low wind speeds? New Phytologist.
Livernois, A.M., Graves, J.A. & Waters, P.D. The origin and evolution of vertebrate sex chromosomes and dosage compensation. Heredity.
Lockett, G.A., Kucharski, R., & Maleszka, R. DNA methylation changes elicited by social stimuli in the brains of worker honey bees. Genes Brain Behav.
Manuel, M., & Forêt, S. Searching for Eve: Basal metazoans and the evolution of multicellular complexity. BioEssays.
Martin, R.E., Butterworth, A.S. Kirk, K., Gardiner, D.L., McCarthy, J.S. & Skinner-Adams, T.S. Saquinavir inhibits the malaria parasite’s chloroquine resistance transporter. Antimicrob. Agents Chemother.
Merlin, S., Horng, S., Marotte, L.R., Sur, M., Sawatari, A., & Leamey, C.A. Deletion of Ten-m3 induces the formation of eye-dominance domains in mouse visual cortex. Cerebral Cortex.
Moya, A., Huisman, L., Ball, E.E., Hayward, D.C., Grasso, L.C., Chua, C.M., Woo, H.N., Gattuso, J-P, Foret, S. & Miller, D.J. Whole transcriptome analysis of the coral Acropora millepora reveals complex responses to CO2-driven acidification during the initiation of calcification. Molecular Ecology.
Murtagh, V., O’Meally, D., Sankovic, N., Delbridge, M.L., Kuroki, Y., Boore, J.L., Toyoda, A., Jordan, K.S., Pask, A.J., Renfree, M.B., Fujiyama, A., Graves, J.A. & Waters, P.D. Evolutionary history of novel genes on the tammar wallaby Y chromosome: Implications for sex chromosome evolution. Genome Research.
Nair, A., Korres, H., & Verma, N.K. Topological characterisation and identification of critical domains within glucosyltransferase IV (GtrIV) of Shigella flexneri. BMC Biochemistry.
Nichol, C.J., Pieruschka, R., Takayama, K., Förster, B., Kolber, Z., Rascher, U., Grace, J., Robinson, S.A., Pogson, B., & Osmond, B. Canopy conundrums: building on the Biosphere 2 experience to scale measurements of inner and outer canopy photoprotection from the leaf to the landscape. Functional Plant Biology.
O’Neill, H.C. Niches for extramedullary hematopoiesis in spleen. Niche: Journal of Cellular Therapy and Regenerative Medicine.
Poorter, H., Atkin, O.K., Finck, A., Fiorani, F., Gibon, Y., Munns, R., Pons, T., Schurr, U., Stitt, M., Tardieu, F., & Usadel, B. The art of growing plants for experimental purposes; a practical guide for the plant biologist. Functional Plant Biology.
Rahimi, F. & Bitan, G. Overview of fibrillar and oligomeric assemblies of amyloidogenic proteins In: Rahimi, F. & Bitan, G. (eds.) Non-fibrillar Amyloidogenic Protein Assemblies—Common Cytotoxins Underlying Degenerative Diseases. Netherlands: Springer Netherlands.
Ramakrishnan, S., Docampo, M.D., Macrae, J.I., Pujol, F.M., Brooks, C.F., van Dooren, G.G., Hiltunen, J.K., Kastaniotis, A.J., McConville, M.J., Striepen, B. The apicoplast and endoplasmic reticulum cooperate in fatty acid biosynthesis in the apicomplexan parasite Toxoplasma gondii. Journal of Biological Chemistry.
Reef, R., Ball, M.C., & Lovelock, C.E. The impact of a locust plague on mangroves of the arid Western Australia coast. Journal of Tropical Ecology.
Sabeti, F., Maddess, T., Essex, R.W., & James, A.C. Multifocal pupillography identifies ranibizumab induced changes in retinal function for exudative age-related macular degeneration. Investigative Ophthalmological & Visual Science.
Sauquet, H., Ho, S.Y.W., Gandolfo, M.A., Jordan, G.J., Wilf, P., Cantrill, D.J., Bayly, M.J., Bromham, L., Brown, G.K., Carpenter, R.J., Lee, D.M., Murphy, D.J., Sniderman, J.M.K., & Udovicic, F. Testing the impact of calibration on molecular divergence times using a fossil-rich group: the case of Nothofagus (Fagales). Syst. Biol.
Slatyer, R.A., Jennions, M.D., & Backwell, P.R.Y. Polyandry occurs because females initially trade sex for protection. Animal Behaviour.
Starrfelt, J. & Kokko, H. Bet-hedging: A triple trade-off between means, variances and correlations. Biological Reviews.
Starrfelt, J. & Kokko, H. The multicausal nature of dispersal. In: Informed Dispersal and Spatial Evolutionary Ecology (J. Clobert, M. Baguette, T. Benton and J. Bullock, eds.) Oxford University Press.
Summers, R.L., Nash M.N., & Martin, R.E. Know your enemy: Understanding the role of PfCRT in drug resistance could lead to new antimalarial tactics. Cellular and Molecular Life Sciences.
Taylor, R.W. Ants of the genus Lordomyrma Emery (2) The Japanese L. azumai (Santschi) and six new species from India, Viet Nam and the Philippines (Hymenoptera: Formicidae: Myrmicinae). Zootaxa.
van Dooren, G.G., Kennedy, A.T., McFadden, G.I. The use and abuse of haem in apicomplexan parasites. Antioxidants and Redox Signaling.
Velten, J., Cakir, C., Youn, E., Chen, J., & Cazzonelli, C.I. Transgene Silencing and Transgene-derived siRNA Production in Tobacco Plants Homozygous for an Introduced AtMYB90 Construct. PLoS ONE.
Williams, M.E., & Matheius, U. Intimate Alliances: Plants and their Microsymbionts. Teaching Tools in Plant Biology. The Plant Cell.
Winterberg, M., Rajendran, E., Baumeister, S., Bietz, S., Kirk, K., & Lingelbach, K. Chemical activation of a high-affinity glutamate transporter in human erythrocytes and its implications for malaria-parasite induced glutamate uptake. Blood.
Wydrzynski, T. & Hillier, W. (Eds). Molecular Solar Fuels. Royal Society of Chemistry.
Zawadzki, J.L., Kotze, A.C., Fritz, J.A., Johnson, N.M., Hemsworth, J.E., Hines, B.M. & Behm, C. A. Silencing of essential genes by RNA interference in Haemonchus contortus. Parasitology.
Zeil, J. Visual Homing – An Insect Perspective. Current Opinion in Neurobiology.
Zishiri, V.K., Joshi, M.C., Hunter, R., Chibale, K., Smith, P.J., Summers, R.L., Martin, R.E., & Egan, T.J. Quinoline Antimalarials Containing a Dibemethin Group are Active against Chloroquine Resistant Plasmodium falciparum and Inhibit Chloroquine Transport via the P. falciparum Chloroquine-Resistance Transporter (PfCRT). Journal of Medicinal Chemistry.
